Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ALSCGEVNSNLKPCTGYLTNG---GI-T-S---------------PGPQCCNGVRKLNGMVLTTLDRRQACRCIKNAARNVGP--GL-------NADRAAGIPRRCGIKIPYSTQIRFNTKCNTVR
1PSY Chain:A ((25-116))
--------KDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQV--------RDECQCEAIKYIAEDQIQQGQLHGEESERVAQRAGEIVSSCGV------------------
General information:
TITO was launched using:
RESULT:
Template:
1PSY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14707 for 437 contacts (-33.7/contact) +
2D Compatibility (PS) -6301 + (NN) -448 + (LL) 2152
1D Compatibility (HY) -4400 + (ID) 1000
Total energy: -24704.0 ( -56.53 by residue)
QMean score : 0.270
(partial model without unconserved sides chains):
PDB file :
Tito_1PSY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PSY-query.scw
PDB file :
Tito_Scwrl_1PSY.pdb
: