Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AMSPSQCKEEQRLLVSACRSILSG-RSPSPSCCQRIRVTH----------VECVCPVVTPKLAA--LIGVERTIKQIEGCGRVVP----HKFKCGSITTP
2ALG Chain:A ((3-91))
-----TCGQVSSSL-APCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNC--LKQLSASVPGVNPNNAAALPGKCGVSIPYKISASTNCATV---
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30944 for 446 contacts (-69.4/contact) +
2D Compatibility (PS) -7337 + (NN) 910 + (LL) 364
1D Compatibility (HY) -2000 + (ID) 800
Total energy: -39807.0 ( -89.25 by residue)
QMean score : 0.389
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: