Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VDCTTVTGLLSTCSAFITYGSPDPYPGSPCCDAVMNLNLIADSTDNRKSVCGCLMGLITTY-NPNSTAIATLPGFCGVALGFTIDPNTDCNFVPLF
1T12 Chain:A ((2-91))
ITCGQVTSNLAPCLAYLRNTG----PLGRCCGGVKALVNSARTTEDRQIACTCLKSAAGAISGINLGKAAGLPSTCGVNIPYKISPSTDCSKVQ--
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -97841 for 673 contacts (-145.4/contact) +
2D Compatibility (PS) -9269 + (NN) -5203 + (LL) 44
1D Compatibility (HY) -4400 + (ID) 1500
Total energy: -118169.0 ( -175.59 by residue)
QMean score : 0.283
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: