Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
SEVPTSRGGMSPTQCKEKQRLLVNACSAVMFGH-S-PSSDCCKHVRLTQV----------QCVCPAITSKLAG--LVGVEHTIKQIESCGRTVP----RNFKCGI
1AFH Chain:A ((2-90))
------------ISCGQVASAI-APCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNC--LKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCS-
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40468 for 504 contacts (-80.3/contact) +
2D Compatibility (PS) -7510 + (NN) -1126 + (LL) 348
1D Compatibility (HY) -800 + (ID) 900
Total energy: -50456.0 ( -100.11 by residue)
QMean score : 0.327
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: