Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSCPNELNRLNVCAPFVVPGVPEATPSSDCCAALQSVQH----------DCLCNTL----------RIASRLPSRCNIPALSCGVQINA
1AFH Chain:A ((3-78))
-SCGQVASAIAPCISYARGQ--GSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVS----------
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31140 for 377 contacts (-82.6/contact) +
2D Compatibility (PS) -5809 + (NN) -4248 + (LL) 928
1D Compatibility (HY) -2400 + (ID) 700
Total energy: -43369.0 ( -115.04 by residue)
QMean score : 0.386
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: