Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGKSSPDNEAIKLAPCAEAAQDQNAAVSASCCDQVRKIGRS--------PSCLCAVMLSNTAKAS-GIKPEIAITIPKRCNIANRPVGYKCGPYTLP
1T12 Chain:A ((3-78))
-------TCGQVTSNLAPCLAYLRNTG--PLGRCCGGVKALVNSARTTEDRQIACTC--LKS-AAGAISGINLGKAAGLPSTCGVNIP------------
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18675 for 455 contacts (-41.0/contact) +
2D Compatibility (PS) -6874 + (NN) 25 + (LL) 500
1D Compatibility (HY) -2800 + (ID) 900
Total energy: -28724.0 ( -63.13 by residue)
QMean score : 0.225
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: