Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ACNAMTLQPCLAASQGKVA-PDPACCTAIKNIGLSA-DG----PQCLCTLATGPLAKAN-GVSADAAMAIPKKCGLPVP----KGFMCNNKPVPGS
1AFH Chain:A ((7-91))
--VASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNC--LKNA-AAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSR------
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21778 for 536 contacts (-40.6/contact) +
2D Compatibility (PS) -7621 + (NN) -3748 + (LL) 380
1D Compatibility (HY) -3200 + (ID) 1050
Total energy: -37017.0 ( -69.06 by residue)
QMean score : 0.416
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: