Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QQQPANCNGQLNQLIPCLSYVQGQATQPAQSCCSGLKSIAG---S----NPACLCSLISANAGSIPGINSTLALELPAKCNLQGLNPSLCSVFISGFLPLR
1BWO Chain:A ((2-78))
-----DCGHVDSLVRPCLSYVQGG-PGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIAR--GIHNLNEDNARSIPPKCGVNLP----------------
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30647 for 447 contacts (-68.6/contact) +
2D Compatibility (PS) -7017 + (NN) -2204 + (LL) 1208
1D Compatibility (HY) -3600 + (ID) 1250
Total energy: -43510.0 ( -97.34 by residue)
QMean score : 0.411
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: