Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QQLPQGCGPKLGVLLPCLPFLQGQGSNPTQPCCNGLETVVK-----L--NPACLCALVNSQLGN-RINITLALSLPSLCNLAGV----TIDLCNPTGKFSFKI
1SIY Chain:A ((2-88))
-----TCGQVQGNLAQCIGFLQKG-GVVPPSCCTGVKNILNSSRTTADRRAVCSCL-KAAAGAVRGINPNNAEALPGKCGVNIPYKISTSTNCN---------
General information:
TITO was launched using:
RESULT:
Template:
1SIY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44003 for 526 contacts (-83.7/contact) +
2D Compatibility (PS) -7514 + (NN) -1004 + (LL) 708
1D Compatibility (HY) -1600 + (ID) 1100
Total energy: -54513.0 ( -103.64 by residue)
QMean score : 0.200
(partial model without unconserved sides chains):
PDB file :
Tito_1SIY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SIY-query.scw
PDB file :
Tito_Scwrl_1SIY.pdb
: