Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVDCTSQLAPVAPCLDYVQGNGKTPSSDCCKGLSSLVT-------TSPVCLCQLSEGKLNLSALGVTVDMKRALSLPTVCKIKGA-DRSRCAGKLSIP
1BWO Chain:A ((2-82))
--DCGHVDSLVRPCLSYVQGG-PGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIA----RGIH-NLNEDNARSIPPKCGVNLPYTIS---------
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20055 for 474 contacts (-42.3/contact) +
2D Compatibility (PS) -7358 + (NN) -995 + (LL) 1096
1D Compatibility (HY) -3600 + (ID) 1150
Total energy: -32062.0 ( -67.64 by residue)
QMean score : 0.162
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: