Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DPDQQPPCNSFMSVLSCQSATMSESAMPSPACCAALQKFHD---------ADCLCQVLLSARSAAATANV-PFNLKAALEIPMKCALRTV-SAPPGYSCGGMVVPRSPPPTST
1T12 Chain:A ((3-89))
-----TCGQVTSNLAPCLAYLRNTG--PLGRCCGGVKALVNSARTTEDRQIACTC--L--K-S--AAGAISGINLGKAAGLPSTCGVNIPYKISPSTDCSK------------
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40274 for 544 contacts (-74.0/contact) +
2D Compatibility (PS) -8243 + (NN) -6586 + (LL) 1328
1D Compatibility (HY) -2400 + (ID) 800
Total energy: -56975.0 ( -104.73 by residue)
QMean score : 0.217
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: