Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AQCNGSPAMLASCLPATQSSTSFPGAQCCSSLTRFRG--------NPDCLCSTMLTARQQF-TFSVPNAFTIPERCGYANEIP--PHYKCGNYVVGH
2ALG Chain:A ((3-89))
-TCGQVSSSLAPCIPYVRGG-GAVPPACCNGIRNVNNLARTTPDRQAACNC--LKQLSASVPGVNPNNAAALPGKCGVSIPYKISASTNCA------
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28723 for 483 contacts (-59.5/contact) +
2D Compatibility (PS) -7713 + (NN) -1164 + (LL) 488
1D Compatibility (HY) -4400 + (ID) 750
Total energy: -42262.0 ( -87.50 by residue)
QMean score : 0.293
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: