Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DPDQQPPCNTFMSVLSCQSATMSESTMPSPACCAALRKFHD---------ADCLCQVLLSARSAAAIANV-PFNLKAALEIPMKCALRTV-SAPPGYSCGGMVVPRSPPPTST
1T12 Chain:A ((3-89))
-----TCGQVTSNLAPCLAYLRNTG--PLGRCCGGVKALVNSARTTEDRQIACTC--L--K---SAAGAISGINLGKAAGLPSTCGVNIPYKISPSTDCSK------------
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47963 for 544 contacts (-88.2/contact) +
2D Compatibility (PS) -8339 + (NN) -6958 + (LL) 1064
1D Compatibility (HY) -2000 + (ID) 750
Total energy: -64946.0 ( -119.39 by residue)
QMean score : 0.273
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: