Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QDCNGLVTTVISQCSGSYGNGSP-PSAGCCRAARAVSN----------GCLCPKVTPQIAA--AVNKQRIQAMASACNRPLP----R--TCGALQF
1AFH Chain:A ((3-92))
-SCGQVASAI-APCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNC-LKN-AAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRV--
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28778 for 497 contacts (-57.9/contact) +
2D Compatibility (PS) -7752 + (NN) -3895 + (LL) 296
1D Compatibility (HY) -3600 + (ID) 900
Total energy: -44629.0 ( -89.80 by residue)
QMean score : 0.231
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: