Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGNASPDTEAWKLAPCAAAAQNEKAAPSKSCCLQVKKIGQN--------PDCLCAVMLSNTAKSS-GIXPEVAVTIPKRCNLADR-P--VGYKCGAYTLP
1T12 Chain:A ((3-89))
-------TCGQVTSNLAPCLAYLRNTG--PLGRCCGGVKALVNSARTTEDRQIACTC--LKS-AAGAISGINLGKAAGLPSTCGVNIPYKISPSTDCSK----
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18243 for 513 contacts (-35.6/contact) +
2D Compatibility (PS) -7821 + (NN) -3589 + (LL) 748
1D Compatibility (HY) -2400 + (ID) 1050
Total energy: -32355.0 ( -63.07 by residue)
QMean score : 0.000
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: