Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QCQGSIQDLKICVPYVQKKGPKIPPSQACCDAIKGVDI----------LCVCHHLPPDIGELISIEKVVFVLQVCREPLA----PGTKCGT
1BWO Chain:A ((2-88))
DCGHVDSLVRPCLSYVQGG---PGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLPYTISLNIDCS-
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31954 for 466 contacts (-68.6/contact) +
2D Compatibility (PS) -7104 + (NN) 382 + (LL) -196
1D Compatibility (HY) -800 + (ID) 800
Total energy: -40472.0 ( -86.85 by residue)
QMean score : 0.300
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: