Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DMSPTECKEERKVAGNACRPVLYWR-SPSADCCQRVRVSHV----------ECVCPYVSTKTAAIIGGLGVPYVVKKIEGCGRTVP----RKFKCGSITTP
1SIY Chain:A ((2-90))
-----TCGQVQGNL-AQCIGFLQKGGVVPPSCCTGVKNILNSSRTTADRRAVCSCLKA---AAGAVRGINPNNAEALPGKCGVNIPYKISTSTNCNSI---
General information:
TITO was launched using:
RESULT:
Template:
1SIY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27448 for 519 contacts (-52.9/contact) +
2D Compatibility (PS) -7473 + (NN) -253 + (LL) -104
1D Compatibility (HY) 0 + (ID) 800
Total energy: -36078.0 ( -69.51 by residue)
QMean score : 0.096
(partial model without unconserved sides chains):
PDB file :
Tito_1SIY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SIY-query.scw
PDB file :
Tito_Scwrl_1SIY.pdb
: