Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
APSAAECKEERRLAINACKPVVYG-KD-PSPACCERARVTHI----------ECVCPVITPKLAA--LIDVNRAVRLIEGCGRKVP----RHYKCGSITTP
1AFH Chain:A ((3-92))
-----SCGQVASAI-APCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNC--LKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRV---
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27918 for 512 contacts (-54.5/contact) +
2D Compatibility (PS) -7631 + (NN) -3626 + (LL) 484
1D Compatibility (HY) -800 + (ID) 800
Total energy: -40291.0 ( -78.69 by residue)
QMean score : 0.364
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: