Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSGCTTVLIGMAPCLNYITGSSSSPSSSCCSQLASVVQ-------SQPRCLCVALNGGGAALGITINRTLALALPGACNVQTP-PVSQCDAA
1BWO Chain:A ((2-82))
--DCGHVDSLVRPCLSYVQGG-PGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGI--ARGIH-NLNEDNARSIPPKCGVNLPYTIS-----
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53570 for 474 contacts (-113.0/contact) +
2D Compatibility (PS) -7587 + (NN) -2811 + (LL) 312
1D Compatibility (HY) -5200 + (ID) 1050
Total energy: -69906.0 ( -147.48 by residue)
QMean score : 0.193
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: