Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGNASPDTEAWKLAPCEAAAQNEKAAPSKSCCLQVKKIGQN--------PDCLCAVMLSNTAKSS-GIKPEVAVTIPKRCNLADR-PV--GYKCGAYTLP
1T12 Chain:A ((3-89))
-------TCGQVTSNLAPCLAYLRNTG--PLGRCCGGVKALVNSARTTEDRQIACTC--LKSA-AGAISGINLGKAAGLPSTCGVNIPYKISPSTDCSK----
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12597 for 523 contacts (-24.1/contact) +
2D Compatibility (PS) -7917 + (NN) -3383 + (LL) 880
1D Compatibility (HY) -3200 + (ID) 1050
Total energy: -27267.0 ( -52.14 by residue)
QMean score : 0.195
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: