Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QGSICRMTQDGLTACKPSVSGQSPLPPSPACCAAISKADL----------PCLCSFKNSALLPYL-GIDPNMATQLPAKCNIVTSTHC
1T12 Chain:A ((3-78))
---TCGQVTSNLAPCLAYLRNTG---PLGRCCGGVKALVNSARTTEDRQIACTC-LKSA--AGAISGINLGKAAGLPSTCGVNIP---
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31538 for 436 contacts (-72.3/contact) +
2D Compatibility (PS) -6457 + (NN) -1424 + (LL) 260
1D Compatibility (HY) -2800 + (ID) 750
Total energy: -42709.0 ( -97.96 by residue)
QMean score : 0.320
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: