Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--VTC--SPLELSSCFAAITSSAP--PSSMCCSKLRE-QRPCLCGYIRDPNLSQY-VNSANARRVASTCGVPFP-NC
2RKN Chain:A ((1-77))AIDLCGMSQDELNECKPAVSKENPTSPSQPCCTALQHADFACLCGYKNSPWLGSFGVDPELASALPKQCGLANAPTC


General information:
TITO was launched using:
RESULT:

Template: 2RKN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28609 for 417 contacts (-68.6/contact) +
2D Compatibility (PS) -6934 + (NN) -2818 + (LL) 0
1D Compatibility (HY) -4800 + (ID) 1200
Total energy: -44361.0 ( -106.38 by residue)
QMean score : 0.617

(partial model without unconserved sides chains):
PDB file : Tito_2RKN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2RKN-query.scw
PDB file : Tito_Scwrl_2RKN.pdb: