Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence---------------------------------------------------------------------------------------------------------------------QPVCPL-NRSDLGICVNVLGLISLTTSNVARCCSILAGLNNTPLVSVCACEAVRLNILNLLGITVNLNLRLNGLLGLCRL----PVQPGFNCLL-----------------------------------------------------------------------------------------------------------------------------------------------------------
1N6M Chain:A ((1-380))MHAALSTEVVHLRQRTEELLRCNEQQAAELETCKEQLFQSNMERKELHNTVMDLRGNIRVFCRIRPPLESEENRMCCTWTYHDESTVELQSIDAQMGQQIFSFDQVFHPLSSQSDIFEMVSPLIQSALDGYNICI---FAYGQTGSGKTYTM-DGVPESVGVIPRTVDLLFDSIRGYRNLGWEYEIKATFLEIYNEVLYDLLSNEQKDMEIRMAKNNKNDIYVSNITEETVLDPNHLRHLMHTAKMNRASSRSHAVTKLELIGRHAEKQEISVGSINLVDLAGSESPKTETKNIKRSLSELTNVILALLQKQDHIPYRNSKLTHLLMPSLGGNSKTLMFINVSPFQDCFQESVKSLRFAASVNSCK


General information:
TITO was launched using:
RESULT:

Template: 1N6M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26010 for 382 contacts (-68.1/contact) +
2D Compatibility (PS) -8729 + (NN) -1058 + (LL) 356
1D Compatibility (HY) -2800 + (ID) 400
Total energy: -38641.0 ( -101.15 by residue)
QMean score : 0.126

(partial model without unconserved sides chains):
PDB file : Tito_1N6M.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1N6M-query.scw
PDB file : Tito_Scwrl_1N6M.pdb: