Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ---------------------------------------------------------------------------------------------------------------------QPVCPL-NRSDLGICVNVLGLISLTTSNVARCCSILAGLNNTPLVSVCACEAVRLNILNLLGITVNLNLRLNGLLGLCRL----PVQPGFNCLL----------------------------------------------------------------------------------------------------------------------------------------------------------- |
1N6M Chain:A ((1-380)) | MHAALSTEVVHLRQRTEELLRCNEQQAAELETCKEQLFQSNMERKELHNTVMDLRGNIRVFCRIRPPLESEENRMCCTWTYHDESTVELQSIDAQMGQQIFSFDQVFHPLSSQSDIFEMVSPLIQSALDGYNICI---FAYGQTGSGKTYTM-DGVPESVGVIPRTVDLLFDSIRGYRNLGWEYEIKATFLEIYNEVLYDLLSNEQKDMEIRMAKNNKNDIYVSNITEETVLDPNHLRHLMHTAKMNRASSRSHAVTKLELIGRHAEKQEISVGSINLVDLAGSESPKTETKNIKRSLSELTNVILALLQKQDHIPYRNSKLTHLLMPSLGGNSKTLMFINVSPFQDCFQESVKSLRFAASVNSCK |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1N6M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -26010 for 382 contacts (-68.1/contact) +
2D Compatibility (PS) -8729 + (NN) -1058 + (LL) 356
1D Compatibility (HY) -2800 + (ID) 400
Total energy: -38641.0 ( -101.15 by residue)
QMean score : 0.126
|
|
|