Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMADNLYLYKGSVKITEMTLNLNEAKIIVYEDSGGNKYTLDASGISTLTNIDDIKLSDLLEGKVKFIYQKKDSNAIQIKGLGNIISTLLATQKAVDGESILAEEVSKKPVVDTILKATDLVNLNKNIVETELEDKFVKKDASNLTDAVNQKAFAEKILPAKDGQKSILVEKLGGLLGEPGAVYGDSNPKITAKDFLAEKASLVKTDGSNIVTQTDKGKALVEAILNAKEPISNKEVKIVETELAKTFVKTA----------DLGTPAVAGKVLDAKDGQKSILVEKLGRFLDTTSTEYSNQTAKVFSGEKGTKPTAEEVVTKLLANNKKDLTDEVAQNPGLRAAVTSNSGLRGTVIDNLKGDTDFKTDITIQVDAKDPAFQGFVREIISQPSFEIPTSDDAPLSWDWI
2VHY Chain:A ((33-130))-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLIQAGAGEGSA---ITDADFKAAGAQLVGT--------ADQVWADADLLLKVKEPIAAEYGRLRHGQILFTFLHLAASRACTDALLDSGTTSIAYETVQTADGALPLLAPMSEVAGRLAAQVGAYHLMRTQGGRGVLMGGVPGVEPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVMKPGAVLVDIALFYCM


General information:
TITO was launched using:
RESULT:

Template: 2VHY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 10107 for 529 contacts (19.1/contact) +
2D Compatibility (PS) -8906 + (NN) 1557 + (LL) 11852
1D Compatibility (HY) -3200 + (ID) 1500
Total energy: 9910.0 ( 18.73 by residue)
QMean score : 0.196

(partial model without unconserved sides chains):
PDB file : Tito_2VHY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2VHY-query.scw
PDB file : Tito_Scwrl_2VHY.pdb: