Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKFTYTRTALASLLTLCSFSGFAADSFNEGMKGVKKQENIKSITTSEKMEVMKTSNKRLKEKMDRICNADPRKKAEELKKKEELKLAAEKKKEELAEKKRKETKLASEKKAKPLDAKNSNVESSKTRGTETQKARDVKKNFKKDVKIVGQNAEKKGEASPVILVGGVDVIDTNQGTSGLKITFGGVVDAQGYGKAGPSGEDYKHYNVMSGKSTGYYEDISDKVKGANPIFPSGIGNIGDYSEDIDMIADAILHLRAEDKNEDKGLLYGADVQFQVPVTEGKGASQGVRATRGRSAHVFLSSRYGDLKLGYQFGPEALMRLDATRIATIDGAADSDWFRKVNLEGSAASFPFYVTPRLYTESFSSESEKLSFRMAGKYHKNVMTTLPFRFAYYSPNYMGARFGVSYSPRYDSNLFVIKDGDNIKHVGPDYEHIVSAGASYEYDFSERKVKVKVAAVGEYGQAKEPDSTKYAYKEYVEYNDLMGVNLGISADCNINEDQGVKFAASFAYLGKSGQPKGIEKLVGNVYQKIDGKGVTDDDKRVKELEDQFKGDDKNTMYWTAGAGYQHENFYISLTYFGSKMSDGDKLHDVAFGIQYDLSPASSKGKFVPYASLHYFKTDEKQGGGYKITKKDSSGIAPSNQGVLFLTGMKFSF |
| 2POR Chain:A ((21-301)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FSSRSRVLFTM-SGTTDSGLEFGASFKAHES-VG---A------ETGEDGTVFLSGAFGKIEMGDALGASEALFGDLYEVGYTDL---DDR----GGND---------IPY--L--T----GD-----------ERLTAEDNPVLLYTYSAGAFSVAASMSDGKVGE--------------TSEDDAQEMAVAAAYTFGN--YTVG--LGYEKIDSPD----------TALMADMEQLELAAIAKFG-----ATNVKAYYADGELDRDFARAV----------------FDL-----TPVAAAATAVDHKAYGLSVDSTFGATTVGGYVQVLDIDTIDDVTYYGLGASYDLGGG-----ASIVGGIADNDLPN--------------------SDMVADLGVKFKF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2POR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 43745 for 2188 contacts (20.0/contact) +
2D Compatibility (PS) -28409 + (NN) -1482 + (LL) 18756
1D Compatibility (HY) 400 + (ID) 2050
Total energy: 30960.0 ( 14.15 by residue)
QMean score : 0.167
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