Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQLPILQVIIPIIASMLCFFTRKHKVSWFISFTT-TIVTLFISSVLLIKTYNGETITYHLGNWAPPYGIELRIDVLNSLILTLVNFVALISVLYSFYINEKEISKNKITGLYSLFLLCLSGLLGILVTNDIFNLYVFLEISSLSSYVLVSMGKDKKALVAAFEYLISGTI-GATFYLLGIGLLYSTTGTLNMSDMAERIVPLYNNNIVK--LGTLF-IFVGLSNKMALF--PLSRWLVNSYSEAPSFVSIFFSGTVTKVMIYVFIRIFYTVFHQNFFLLKLPLSNVIIILALCAIVFGSIFAITAKDIRRLFAHSSVSQIGYIILVLSLNSKIALSAAILHIINHSIIKTSLFMVAGCISYKFGTTKIENLSGLKKSMPYIAFAFTLLSLALVGVPLTNGFISKWYIINVIIESHARISLIVFVVGSFLALIYMWKAVEKMYFESDAVSCVEMTSGKTDVPFPMLFCPLFMATLTLVVGVYSN-PIRLVVEKLVF |
| 4I6M Chain:B ((3-439)) | ---PFRQDSILIIYP----RSQTTLVQFGLNEETFTVPELEIPTQIYRTTRQDGSYTYHSTN--KDNKAELIKPIQNGEIIDISAFTQFLRLIFVSILSDRANKNQDAFEAE------LSNIPLLLITHHSWS---QSDLEIITQYVFESLEIN--NLIQLPASLAATYSMISL----------QNCCIIDVGTHHTDIIPIVDYAQLDHLVSSIPMGGQSINDSLKKLLPQWDDDQIESLKKSPIFEVLSKNSDLEFNTFWDEKGNEIKVGKQRFQGCNNLIKNISNRVGLTLDNIDD-----INKAKAVWEN--------IIIVGGTTSISGFKEALLGQLLKDHLIIEP-----------EEEKSKREEEAKSFVPTIEYVQCPTVIKLAKYP---DYFPEWKKSGY--------SEIIFLGAQIVSKQIFTHPKDTFYITREKY----------------------------------NMKGPAALWDVQF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4I6M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -388216 for 3032 contacts (-128.0/contact) +
2D Compatibility (PS) -40153 + (NN) -739 + (LL) 9252
1D Compatibility (HY) -6800 + (ID) 2900
Total energy: -429556.0 ( -141.67 by residue)
QMean score : 0.219
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