Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSILLELQFYLSLPHIFSYQQMHKNEEISEAKTSRNAEEVKEIVKTQLEGLKQLKKQLKQKLGV
3T98 Chain:A ((459-486))
--------------------------------DADLLREIKQHLKQQQEGLSHLISIIKD----
General information:
TITO was launched using:
RESULT:
Template:
3T98.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 7227 for 105 contacts (68.8/contact) +
2D Compatibility (PS) -3101 + (NN) -2923 + (LL) 3420
1D Compatibility (HY) -1200 + (ID) 450
Total energy: 2973.0 ( 28.31 by residue)
QMean score : 0.652
(partial model without unconserved sides chains):
PDB file :
Tito_3T98.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3T98-query.scw
PDB file :
Tito_Scwrl_3T98.pdb
: