Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGAACRGYCRKIY-LAIDNVLYAI--NETMVMWKKELKS-----LVKGNPTIFNDKLAISTL------DDCLYMLDMRMIVQSGPIISPVIMIVTK
1W6S Chain:A ((123-191))
----------LILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLL
General information:
TITO was launched using:
RESULT:
Template:
1W6S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34993 for 312 contacts (-112.2/contact) +
2D Compatibility (PS) -5543 + (NN) 5675 + (LL) 556
1D Compatibility (HY) -2000 + (ID) 600
Total energy: -36905.0 ( -118.29 by residue)
QMean score : 0.096
(partial model without unconserved sides chains):
PDB file :
Tito_1W6S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W6S-query.scw
PDB file :
Tito_Scwrl_1W6S.pdb
: