Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHKILILLLIILPIKLLAVEIEIIADVNGEPISNLDIEKRINLTHSLFGTQSIDKNELKLQILKQLIDEIIIINEAQRLNIKLSDEELSNAVVLFLTQSFKLKDNEVDQYAKEHNIGLNILKRQIECQLLWDKIIEVRIVPFINISDKEVNNAKGQIEK----PDYLITFQEFIIPNQKDADVYGIAEDLVEKLRN------NNN---DFIPEAPIKM-R----K-VTVNLNQLKGNLKSILEGLKTGDIA-GPVSSSEDYSIVKVIDKVQLDHA-MLESTLKLKQIVVKDSESLLDNLKEQKVNCLNFDELADNFNLPNAKEFEIKMRDLNPDLQALFSKTSVNEIIESRENSTARLMMLCDIKNNVVDAEATKQQIYQQKIMTQSNLLLDNLRKNAAVSYQYS |
| 3RFW Chain:A ((22-254)) | ---------------------ATVATVNGKSISDTEVSEFFAPMLRGQDFK-TLPDNQKKALIQQYIMQDLILQDAKKQNLEKDPL-YTKELDRA------------------------------KDAILVNVYQEK-ILNTIKIDAAKVKAFYDQNKDKYVKPAR-VQAKHILVATEK------EAKDIINELKGLKGKELDAKFSELAKEKSIDPGSKNQGGELGWFDQSTMVKPFTDAAFALKNGTITTTPVKTNFGYHVILKENSQAKGQIKFDEVKQGIENGLKFEEFKKVINQKGQDLLNSAKVEYK-------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RFW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -42287 for 1230 contacts (-34.4/contact) +
2D Compatibility (PS) -22362 + (NN) -3338 + (LL) 13140
1D Compatibility (HY) -2000 + (ID) 1600
Total energy: -58447.0 ( -47.52 by residue)
QMean score : 0.358
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