Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFLKVFKSIFLFLVSILFVCPILSLVSILFTESTNSEWVISTLFPEYILNTLILMIGVGSISFIFGVIPAWLTTFFSFPGSRIFEVALFFPISIPGYIISFVYVNSLEFSGPTQSLLREIFHWGKGDYWFPEIKSLGGGILVMGFSLYTYVYILVRSNLKNVSNSVTVASTLGFSSLQSLFSVVIPSIRPSIIAGISLVLMEVITDFGTPQFLAIDTFTTGIYRTWFLLHDKYSAAVLAVAELVFITALIAVEKILQKKEISYSAINTNSDYHNKRSISGAIPLVFAYAMCILPILVGFALPIIPLIYWS---IEKGFFIY-GARFYNIIANSIGLSFITAMISVSIAIMIGCTARKN--KVINNIARLISLGYAIPNAVIAISIIIFLSKISSFITQYFTEISLVGTVGALIYSYLFRFFAISFKAIESGLKKTPNEIEWIAYTMGHGPISTCLNIHIPLIKKSILSGFLLVFMDTIKELTATLIIRPFNFETISTRIYELVSDERYREAAPFSLMIVITGLISTIILFKLDDENKK |
2ONK Chain:C ((34-275)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLSSIILLFVLLPVAATVTLQLFNFDEFLKAASDPAVWKVVLTTYYAALISTLIAVIFGTPLAYILARKSFPGKSVVEGIVDLPVVIPHTVAGIALLVVFGS-SGLIGSFSP-LKFVDALPGIVVAMLFVSVPIYINQAKEGFASVDVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVAGAIMSWARGISEFGAVVVIAY-YPMIAPTLIYERYLSEGLSAAMPVAAILILLSLAVFVALRIIVG---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ONK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -195584 for 1780 contacts (-109.9/contact) +
2D Compatibility (PS) -23710 + (NN) 1911 + (LL) 24392
1D Compatibility (HY) -22800 + (ID) 2050
Total energy: -217841.0 ( -122.38 by residue)
QMean score : 0.273
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