Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MESRRGRIRPENSARELRLRQNRRNTGRMMMKEVTEGLRQFELKSEIERREREPETFEDGTRKLLMGLT
3SL9 Chain:C ((7-33))
----------------------------------PDGLS----QEQLEHRERSLQTLRDIQRMLF----
General information:
TITO was launched using:
RESULT:
Template:
3SL9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5010 for 106 contacts (47.3/contact) +
2D Compatibility (PS) -2856 + (NN) 1154 + (LL) 3392
1D Compatibility (HY) -2000 + (ID) 450
Total energy: 4250.0 ( 40.09 by residue)
QMean score : 0.353
(partial model without unconserved sides chains):
PDB file :
Tito_3SL9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3SL9-query.scw
PDB file :
Tito_Scwrl_3SL9.pdb
: