Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | --------------MEEKDSNFAMEKP---GNNYVGCISSENGECKNFYDLKL----NFVKYNSGNNSSLYPYYYNLENFGNFLEVDVKLRELIGLKKGLKD-------------------- |
2SCU Chain:A ((1-119)) | SILIDKNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGG-TTHLGLPVFNTVREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAGVRMIGP |
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General information:
TITO was launched using:
| RESULT:
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Template: 2SCU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 627 for 504 contacts (1.2/contact) +
2D Compatibility (PS) -8371 + (NN) -2292 + (LL) 56
1D Compatibility (HY) -3200 + (ID) 600
Total energy: -13780.0 ( -27.34 by residue)
QMean score : 0.217
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