Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MWIKNKVFNRRAFILGGIQLTISTIFSCRLYSLQIRNRQKYEKLADNNRIRVAAIMPKRGRILDRNGIELA--------------VDKISYIVLFDKQKISSE------EVDW------------ETLSEIESNVTKSSETKITALYKRHYPFGSICSHTLGYT----------KKQQGINEA---GISGIEYTYDHILKGKPG-RSEQEINSKKRIVRELSSIPQQDGQDVQLTIDIDLQEKIAEIFKGHKGSVTAIDVGNGEILTLYNSPSYDNNLFANKLSNEAWEGLNTPSL-PLVNRALSYQI--PPGSIFKIIVALAGLKDGIITPEEKFSCVGYMKIGERRF----CCLKSKVHGYVSLNEAMALSCNTYFYNIGKKISVDSLVEMARKFGIGSGPLIGAFKEEAPGLLP--DKDWRTRKLYSEWYLGDTVNLVIGQGYVLTTPLQ-LAVLAARIATGKEVIPRIEMSKTMQDFPDIDIAHEHLSIVRKAMFNMVNI--KAGTYRKGLSSIRIAGKTGTPEINSKGESHK---LFIAYGPYHDPRYAISVFIEYGKAPRQDVAMANEILRYMLKG |
| 1VQQ Chain:A ((120-620)) | -------------------------------------------------IHIENLKSERGKILDRNNVELANTGTAYEIGIVPKNVSKKDYKAIAKELSISEDYIKQQMDQNWVQDDTFVPLKTVKKMDEYLSDFAKKFHLTTNETESRNYPLEKATSHLLGYVGPINSEELKQKEYKGYKDDAVIGKKGLEKLYDKKLQHEDGYRVTIVDD-SNTIAHTLIEKKKKDGKDIQLTIDAKVQKSIYNNMKNDYGSGTAIHPQTGELLALVSTPSYDVYPFMYGMSNEEYNKLTEDKKEPLLNK---FQITTSPGSTQKILTAMIGLNNKTLDDKTSYKIDGKGWQKDKSWGGYNVTRYEVVNGNIDLKQAIESSDNIFFARVALELGSKKFEKGMKKLGVG---------EDIPSDYPFYNAQISNKNLDNEILLADS---GYGQGEILINPVQILSIYSALENNGNINAPHLLKDTKNKVWKKNIISKENINLLTDGMQQVVNKTHKEDIYR---SYANLIGKSGTAELK-----GRQIGWFISYDK-DNPNMMMAINVK----DVQDKGMASYNAKISGKV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VQQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -156785 for 3387 contacts (-46.3/contact) +
2D Compatibility (PS) -44274 + (NN) -4907 + (LL) 5092
1D Compatibility (HY) -17600 + (ID) 6600
Total energy: -225074.0 ( -66.45 by residue)
QMean score : 0.376
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