Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MISGYKNHDLETFDDIFDSVFKIVYFQDKQLHEILDSGEISKVLEILEIPHPSGKSFFLKEYLQKQVCRKKRAITQNSFRHFHTTIFSTTYKHFS
1FAF Chain:A ((3-21))
--------------------------------RVLSRADKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGSHALMQELNSLWGTFKTE
General information:
TITO was launched using:
RESULT:
Template:
1FAF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3556 for 73 contacts (-48.7/contact) +
2D Compatibility (PS) -1817 + (NN) 610 + (LL) 2256
1D Compatibility (HY) -2400 + (ID) 250
Total energy: -5157.0 ( -70.64 by residue)
QMean score : 0.448
(partial model without unconserved sides chains):
PDB file :
Tito_1FAF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FAF-query.scw
PDB file :
Tito_Scwrl_1FAF.pdb
: