Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MILRNLLFLLPPEIAHSLAIM-----MLKRISYRKPIELPESLSVNCFNNKFRSPVGLAAGFDKNAEVIRSMLSFGFGFIEAGTVTKHPQYGNAKPRIFRLIEDQGVINRLGFNNKGIDYF-----LKQISETKL--DDCILGINIGKNSASKDQVSDYIDLIKMVYGKSSYIVLNISSPNTPNLRNLHNRQELSELLKSITLTRKSIDNSESVPIMLKISPDIDQQTKEDIAGLALEYKIDGLTISNTTVSRDN--LHSHHNESGGLSGRPLFKLSTELLSDIYKLTQGKILLIGCGGISSGADAYKKIKAGASLVQLYTALIYHGPRAVNKINLELAELVRKDGLSNIGEAVGCDCRF |
4LS1 Chain:A ((36-389)) | -LMPTLQGLLDPESAHRLAVRFTSLGLLPRARFQDS----DMLEVRVLGHKFRNPVGIAAGFDKHGEAVDGLYKMGFGFVEIGSVTPKPQEGNPRPRVFRLPEDQAVINRYGFNSHGLSVVEHRLRARQQKQAKLTEDGLPLGVNLGKNKTSVDAAEDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYTALTFWGPPVVGKVKRELEALLKEQGFGGVTDAIGADHRR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LS1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -166055 for 3084 contacts (-53.8/contact) +
2D Compatibility (PS) -36789 + (NN) -18446 + (LL) 552
1D Compatibility (HY) -28400 + (ID) 7800
Total energy: -256938.0 ( -83.31 by residue)
QMean score : 0.521
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