Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKIIEIRAPKTLGGESITEGVIKIKKSIGEAIEVDDLIFEIETDKTALELTAEASGQITEFLVSEGDVISPDQLLAKLSVGEVKKEDKSENLAKRDAPSARKIMEENAISTESVKGTGMGSRITKADVIDHMRKAEQPTIKQYELPKSAASGERREERVKMSKIRQVIAARLKASQNTAAILTTFNEIDMKNVIDLRAKYKETFEKKYGIKLGFMSFFIKAAVQALREIPEINAEI--SGDEIIYKRYYDIGVAVGTNKGLVVPAIRNADQMSFAEIELTLADLGKKAREGKLQVSEMEDATFTISNGGVYGSLLSTPIINPPQSGILGMHSIQNRPFAVGNSIEIRPMMYIALSYDHRIIDGKGAVTFLVKIKNYIEDPNRLVLEV |
| 1EAE Chain:A ((16-237)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------EEVPMTRLMQIGATNLHRSWLNVPHVTQFESADITELEAFRVAQKAV-AKKAGVKLTVLPLLLKACAYLLKELPDFNSSLAPSGQALIRKKYVHIGFAVDTPDGLLVPVIRNVDQKSLLQLAAEAAELAEKARSKKLGADAMQGACFTISSLGHIGGTAFTPIVNAPEVAILGVSKASMQPVWDGKAFQPRLMLPLSLSYDHRVINGAAAARFTKRLGDLLADIRAILL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EAE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -119699 for 1671 contacts (-71.6/contact) +
2D Compatibility (PS) -24068 + (NN) -12642 + (LL) 11016
1D Compatibility (HY) -14400 + (ID) 4050
Total energy: -163843.0 ( -98.05 by residue)
QMean score : 0.445
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