Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKDNLVCMGIITSPHGIKGAVKVKIFTEKPENISLYGKLISGSKNYDIDSVSVIGENLVIATINGVNSRNEAEFLRNKKLYVERNKLLKLNDENEFYQSDLVNMEIRLENDELYGYIKSIYNFGSGDILEISVISTKKNIMLPFTKEIFPYVNIKERYITLNMPEFIG |
3U28 Chain:C ((63-95)) | -----------------------------------------------------------------------------------------------------FNAPIYLENKTQVGKVDEILGPLNEVFFTIKCG---------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3U28.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12186 for 147 contacts (-82.9/contact) +
2D Compatibility (PS) -3410 + (NN) -168 + (LL) 8716
1D Compatibility (HY) -2400 + (ID) 400
Total energy: -9848.0 ( -66.99 by residue)
QMean score : 0.427
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