Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAERANDIRPGQVLEHNGGLFLVVSIMHTQPGKGGAYIQAEMKNIKTGAKLYERFRSDATIRRAILDEEEYIYLFTEGNIVNLMHPSNYEQITINLDLLEEKKIYLQDNMR--IKVVTYQDKIIFAHVPDYVRLTVKETESFIKGQTITSSYKPAVLENGMRINVPQFIKEEDKIVVYTPDDSYYERVKE
3OYY Chain:A ((3-189))
SMKTAQEFRAGQVANINGAPWVIQKAEFNKSGRNAAVVKMKLKNLLTGAGTETVFKADDKLEPIILDRKEVTYSYFADPLYVFMDS-EFNQYEIEKDDLEGVLTFIEDGMTDICEAVFYNDKVISVELPTTIVRQIAYTEPAVRGDTS--VMKTARLNNGAELQVSAFCEIGDSIEIDTRTGEYKSRV--
General information:
TITO was launched using:
RESULT:
Template:
3OYY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -89945 for 1203 contacts (-74.8/contact) +
2D Compatibility (PS) -19747 + (NN) -5298 + (LL) 164
1D Compatibility (HY) -8800 + (ID) 2600
Total energy: -126226.0 ( -104.93 by residue)
QMean score : 0.507
(partial model without unconserved sides chains):
PDB file :
Tito_3OYY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OYY-query.scw
PDB file :
Tito_Scwrl_3OYY.pdb
: