Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEEACKTCEESQRELERELENLESQLSAVEKEKEDLENESAELQKQVQTLKEDKKMCKKD
3Q8T Chain:A ((192-221))
--------------LIQELEDVEKNRKVVAENLEKVQAEAERLD----------------
General information:
TITO was launched using:
RESULT:
Template:
3Q8T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6054 for 110 contacts (55.0/contact) +
2D Compatibility (PS) -3445 + (NN) -2966 + (LL) 2552
1D Compatibility (HY) -2000 + (ID) 450
Total energy: -255.0 ( -2.32 by residue)
QMean score : 0.800
(partial model without unconserved sides chains):
PDB file :
Tito_3Q8T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3Q8T-query.scw
PDB file :
Tito_Scwrl_3Q8T.pdb
: