Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------------------MSSLYLRSHSLSKLNSSLFAVNNNQNVEPRSDISTGLFKLKNSVYPPTFTMGSHLSNNKILPLYCQNHGHDNMQYYNIIIWIT-TMLKA---------------------------------------------------------------------------------------------------------------------- |
| 3R4D Chain:B ((1-254)) | YIGDFRCIQLVNSNGANVSAPSISTLTGYYPVDGSKFRNLALTGTNSVSLSWFQPPYLSQFNDGIFAKVQNLKTSTPSGATA---------YFPTIVIGSLFGYTS----------------YTVVIEPYNGVIMASVCQYTICQLPYTDCKPNTNGNKLIGFWHTDVKPPICVLKRNFTLNVNADAFYFHFYQHGGTFYAYYADKPSATTFLFSVYIGDILTQYYVLPFICNPTAGSTFAPRYWVTPLVKRQY |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3R4D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -12926 for 259 contacts (-49.9/contact) +
2D Compatibility (PS) -6683 + (NN) 24 + (LL) 1308
1D Compatibility (HY) -4400 + (ID) 800
Total energy: -23477.0 ( -90.64 by residue)
QMean score : 0.130
|
|
|