Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFEWNTNNIIDATGGRGKSGCHNLNISTDTRNIKKGDLFIALKGKNFDGHDFLHEAFLKGAAAAVVSEDKYRNLPVIVVQDTLKALHDMASYYIRNVLVNAEVIAITGSVGKTTTKDMLHTVLSQYGVSHVNDGNLNNNIGLPLTILKAPENCRYLILEMGMNKAGEIKELSKISNPNIAVITNIEPVHVENFSSLFDIAQAK-LEILYGVKNNGTLILNKDNKYYDYLLSHVDRDVVSFGRSESATVCLLNVIKNDKGLNLKIRLNNNQIMNCNLCVQGKHFVYSVLAVVAVIQNLGLNLSKLPLALENFNITKGRGSVHKAKY---NGKCIHLIDDSYNASPA----SMKAAIRTLG-----------IYSNRRKVALLGDMLELGNKSITFHMKLLDSIVKYDV---DKVYTVGKFMLKLHRLLP--GNIKGTHFNDSNQLKSNLANIVQNNDVVLVKGSRGVKMDFIVQGFIIEY |
| 1P3D Chain:A ((167-462)) | --------------------------------------------------------------------------------------------------------------------------------------------------------SRYLIAEADESDASFLH-----LQPMVSVVTNMEPDHMDTYEGDFEKMKATYVKFLHNLPFYGLAVMCADDPVLMELVPKVGRQVITYGFSEQADYRIEDYEQTGFQGHYTVICPNNERINVLLNVPGKHNALNATAALAVAKEEGIANEAILEALADFQ-GAGRRFDQLGEFIRPNGK-VRLVDD-YGHHPTEVGVTIKAAREGWGDKRIVMIFQPHRYSRTRD--LFDDFVQV--------LSQVDALIMLDVYAAGEAPIVGADSKSLCRSIRNLGKVDPILVSDTSQLGDVLDQIIQDGDLILAQGAGSVSKISRGLAESW-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1P3D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127954 for 1982 contacts (-64.6/contact) +
2D Compatibility (PS) -29438 + (NN) -11551 + (LL) 10164
1D Compatibility (HY) -15200 + (ID) 3900
Total energy: -177879.0 ( -89.75 by residue)
QMean score : 0.476
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