Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFIGNRNRNKVERAISEIRRGLPIIIYDKSN----YLLVAAAETLE-KDLFNQYGLISGKIYVILPSSKVTCISQNVEH--------SSKRLLI-----------NNFDELFHLVNCSKEDH---------T-----K---ELQRSKAIDECAITLLKSSELLPYALVVDVNFKD----------------EYEMRGWCEKSDVIALDVLFINNFQ--QNQDIYEVCKTPLFLKQTQKVNIISYRTCNGRKEHYAIIIGNPGKNSEPLVRVHSSCYTGDLLDSLSCDCRSQLHQAIQIMTDSGNGIILYLMQDGRGIGLTNKLRAYDMQRKYNLDTVDANRILGFEDDERSFAVAAEMLKKLGIKKIQLLTNNGRKLSELKNNGIEVTRCLPLIMERNKYNDSYIETKFSRLGHRLRTF |
| 1K4I Chain:A ((12-227)) | -------FDAIPDVIQAFKNGEFVVVLDDPSRENEADLIIAAESVTTEQMAFMVRHSSGLICAPLTPERTTALDLPQMVTHNADPRGTAYTVSVDAEHPSTTTGISAHDRALACRMLAAPDAQPSHFRRPGHVFPLRAVAGGVRARRGHTEAGVELCRLAGKRPVAVISEIVDDGQEVEGRAVRAAPGMLRGDECVAFARRWGLKVCTIEDMIAHVEKTEGKL---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1K4I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -120442 for 1222 contacts (-98.6/contact) +
2D Compatibility (PS) -16682 + (NN) -7395 + (LL) 12788
1D Compatibility (HY) -3600 + (ID) 950
Total energy: -136281.0 ( -111.52 by residue)
QMean score : 0.368
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