Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEYEQWKEILSAIDKETDLSKDNVIAKIKEKLKALDSSTYEEWKETNFDVNHLFAVKYGLLHLAVHNNLKNVVNALFGVEGIDVNAVDKDKHTSLHLAVEKGHIGIVNSLLEVKADVNVEDENGKTPLYTAVQFGCKGEIEVLIGKMMIGALIRAGANVNAEDKDKCTPLHFAARCGRKEIVQTLIEAGANVNAANEDKRTPSHIATQFCRKEIVKVLVEAGADVRAADKYGITPLHFA---DGAETVKTLIGAGANVNVVDKDKRTPLHWVKGAETAETLIEAGVNVNTIDKGKRNPLHMAARCSCEGVIKTLIGKRADLLSKNNDSKIPSNFNKSHYIIRRVKSLWSEERMKRLDQQSKVSFVVFGLTILFGTATATTLFVTETIAFGPYPIIGTVVIVAAAAWVVSCAADKILEPSTKIDEMKAVQVDENMQKAPLNLST |
3AJI Chain:A ((37-215)) | ---------------------------------------------------------------------------------------DQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAG----------DEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLGLILKRLAEGEEASM-------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AJI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87326 for 1536 contacts (-56.9/contact) +
2D Compatibility (PS) -18473 + (NN) -4783 + (LL) 19328
1D Compatibility (HY) -6400 + (ID) 3350
Total energy: -101004.0 ( -65.76 by residue)
QMean score : 0.546
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