Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYYDDGIPVFDSLDKLTKPNSMKVVSSDSSEKGDIVLEPLESGFALTLGNALRRVMLSSLIGSAVYGIKIDGITHEFTSIQGVREDVTDIVLNMGMLRCKLNGTSNKCLSLSAKGPCQVLAGMIETDDQCSIVNKDLLICTLG-QDVELNMTIYVASGKGYLPV-TKYKENEFLKPMNEQDLISFIPVNALYSPINRVSYRVENSRVGQVTDKDKLILSVETDGTISPSQAVDSAARILQEQLQPFISSDISYKKSQVSSPSGYKDLGYDPILLRKVDEMELSVRSHNCLKNENITYIGDLVQKTESEMLRTANFGRKSLNEIKAVLNNFGLSLGMDIPDWPPKDIDELARQHTDED |
4ZH2 Chain:A ((26-330)) | ----------------------------SSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVEIDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVILTLNKSGIGPVTAADITHDGDVEIVKPQHVICHLTDENASISMRIKVQRGRGYVPASTRIHSEEDERP------IGRLLVDACYSPVERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAF--------------PE------FDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSLTEIKDVLASRGLSLGMRLENWPPA------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ZH2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -174950 for 2038 contacts (-85.8/contact) +
2D Compatibility (PS) -30147 + (NN) -9826 + (LL) 2888
1D Compatibility (HY) -28800 + (ID) 7150
Total energy: -247985.0 ( -121.68 by residue)
QMean score : 0.479
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