Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFKELYRDSIVKSLKDKFNYGNIMQVPKLVKVCINMGVGGAATDNKAINEPFDDLYLIAGQKPVSTFAKKSISGFKIRKGATVGCKVTLRRDKMYEFLERLIYVALPREKDFRGFSVKQFDGNGNFSFGIKEHISFLEIDYDKISKIRGMDINIVTSAASDKEAKELLLAFKFPFFD |
1NWY Chain:D ((4-177)) | -LKTKYNDQVRPALMQQFGYSSVMAVPRIEKIVVNEGLGSSKEDSKAIDKAAKELALITLQKPIITKAKKSISNFKLRQGMPVGIKVTLRGERMYVFLEKLINIGLPRIRDFRGINPNAFDGRGNYNLGIKEQLIFPEITYDMVDKTRGMDITIVTTAKTDEEARALLQSMGLPFRK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NWY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1395153 for 12880 contacts (108.3/contact) +
2D Compatibility (PS) -16122 + (NN) 3252 + (LL) 208
1D Compatibility (HY) 6400 + (ID) 450
Total energy: 1388441.0 ( 107.80 by residue)
QMean score : ?
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