Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIQKNTLLEVADNSGAREVLCIGLLGG--------------RKSASIGDTIVVSTKSVNPKGKVEKGKVYRAVVVRVKNCIRKSDNSVIRFSSNAVVLVNNQGEPLGTRVFGPV-KKLPSGSFMKIMSLAVEVL
2ZJP Chain:H ((1-134))
MIMPQSRLDVADNSGAREIMCIRVLNSGIGGKGLTTGGGGNKRYAHVGDIIVASVKDAAPRGAVKAGDVVKAVVVRTSHAIKRADGSTIRFDRNAAVIINNQGEPRGTRVFGPVARELRDRRFMKIVSLAPEVL
General information:
TITO was launched using:
RESULT:
Template:
2ZJP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -77471 for 958 contacts (-80.9/contact) +
2D Compatibility (PS) -13152 + (NN) -6271 + (LL) 0
1D Compatibility (HY) -10800 + (ID) 3300
Total energy: -110994.0 ( -115.86 by residue)
QMean score : 0.521
(partial model without unconserved sides chains):
PDB file :
Tito_2ZJP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZJP-query.scw
PDB file :
Tito_Scwrl_2ZJP.pdb
: