Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRSAWKPPFCHPSVLRLVNRALKQGSINKVIKIHSRASVILPNCLGLKFAVYNGKDYIPVSVNDQNMIGHKFGEFSPTRKFAGHNGDKKAVRR
1XNQ Chain:S ((2-81))
-PRSLKKGVFVDDHLLEKVLELNAKGE-KRLIKTWSRRSTIVPEMVGHTIAVYNGKQHVPVYITE-NMVGHKLGEFAPTRTYR-----------
General information:
TITO was launched using:
RESULT:
Template:
1XNQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59018 for 503 contacts (-117.3/contact) +
2D Compatibility (PS) -8762 + (NN) -3566 + (LL) 740
1D Compatibility (HY) -6000 + (ID) 1700
Total energy: -78306.0 ( -155.68 by residue)
QMean score : 0.533
(partial model without unconserved sides chains):
PDB file :
Tito_1XNQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XNQ-query.scw
PDB file :
Tito_Scwrl_1XNQ.pdb
: