Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEIISLNNNSCSVEIKKKLLSIITKVIEKNTWTQAHAAERLGVDQPKISQIKNGKTDGFSLERLLGFLKKFDHEITITITESQAVKPETEKVKREVGSP
3F6W Chain:A ((12-80))
---------------YQALLDLLLEARSAAGITQKELAARLGRPQSFVSKTENAERR-LDVIEFMDFCRGIGTDPYALLSKLEAMTP------------
General information:
TITO was launched using:
RESULT:
Template:
3F6W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17070 for 451 contacts (-37.8/contact) +
2D Compatibility (PS) -7463 + (NN) -2908 + (LL) 1684
1D Compatibility (HY) -4000 + (ID) 650
Total energy: -30407.0 ( -67.42 by residue)
QMean score : 0.604
(partial model without unconserved sides chains):
PDB file :
Tito_3F6W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F6W-query.scw
PDB file :
Tito_Scwrl_3F6W.pdb
: