Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLDHSTSYGLITNIRPSPSWLSKLSFWRKKTLLISQFRTSVALYVNENNHILNAIKGSSLSKILDRVNIRDKDGLSALHLTVKGGNVNIVKLLLDGGAEPNIRSWMNLTTPLHNAVLNNRVYIVKLLFDSHANSNILSRSDISPLYFAVVNN
4HLL Chain:A ((43-124))
------------------------------------------------------------------VNARDSIGSTPLHLAAYYGHLEIVRLLLEHGADVNARDSTG-TTPLHYAARLGHLEIVRLLLEHGADVNARDAMGWTPLHLAAKKG
General information:
TITO was launched using:
RESULT:
Template:
4HLL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33766 for 665 contacts (-50.8/contact) +
2D Compatibility (PS) -8838 + (NN) -5726 + (LL) 4556
1D Compatibility (HY) -2400 + (ID) 1650
Total energy: -47824.0 ( -71.92 by residue)
QMean score : 0.430
(partial model without unconserved sides chains):
PDB file :
Tito_4HLL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HLL-query.scw
PDB file :
Tito_Scwrl_4HLL.pdb
: