Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLNMAEIKKDVAVIMGSESDYSTMIHAVDMLTELGILHDVFIISAHRTPERLFNFAQSAQEKGFRVIIAGAGGAAHLPGMVASLTCLPVIGVPVHSKQLNGLDSLLSIVQMPKGVPVATMSIGESGAYNAAIAAASVLSISNSEIADRLKKWRKEQTEVVKEKPASQ
2FW8 Chain:A ((24-178))
----------VGIIMGSQSDWETMRHADALLTELEIPHETLIVSAHRTPDRLADYARTAAERGLNVIIAGAGGAAGLPGMCAAWTRLPVLGVPVESRALKGMDSLLSIVQMPGGVPVGTLAIGASGAKNAALLAASILALYNPALAARLETWRALQTASVPNSPI--
General information:
TITO was launched using:
RESULT:
Template:
2FW8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -160212 for 1278 contacts (-125.4/contact) +
2D Compatibility (PS) -16909 + (NN) -5762 + (LL) 1108
1D Compatibility (HY) -15600 + (ID) 4650
Total energy: -202025.0 ( -158.08 by residue)
QMean score : 0.672
(partial model without unconserved sides chains):
PDB file :
Tito_2FW8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FW8-query.scw
PDB file :
Tito_Scwrl_2FW8.pdb
: